C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 6 (neurotransmitter transporter), member 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000230671 SLC6A7-001 ENSG00000011083 9606 + 5:150189957-150211072 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalColonLiverOvaryPlacentaTestisENST00000230671
Transcript ID Adipose Adrenal Colon Liver Ovary Placenta Testis
ENST00000230671 0.035±0.00 0.041±0.00 0.289±0.00 0.006±0.00 0.071±0.01 0.062±0.00 0.099±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00091Q CIL_00091Q_0001 VISTA 5:150006686-150608670

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005328 IEA neurotransmitter:sodium symporter activity
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0006810 TAS transport
GO:0006836 IEA neurotransmitter transport
GO:0015824 TAS proline transport
GO:0016020 TAS membrane
GO:0016021 IEA integral component of membrane
GO:0055085 TAS transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000025520 Slc6a7-201 protein_coding Mus_musculus 0 2597

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