C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TRAF-type zinc finger domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000257604 TRAFD1-201 ENSG00000135148 9606 + 12:112125545-112153603 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonLiverLungOvaryPlacentaTestisENST00000257604
Transcript ID Brain Breast Colon Liver Lung Ovary Placenta Testis
ENST00000257604 0.395±0.00 0.940±0.00 2.264±0.00 1.133±0.00 6.251±0.00 5.716±0.00 2.671±0.00 5.046±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0034097 IEA response to cytokine
GO:0045824 ISS negative regulation of innate immune response
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000042312 Trafd1-001 protein_coding Mus_musculus 0 1419
ENSMUST00000120784 Trafd1-002 protein_coding Mus_musculus 0 1358
ENSMUST00000156158 Trafd1-003 retained_intron Mus_musculus 0 315

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