C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ADNP homeobox 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000262198 ADNP2-001 ENSG00000101544 9606 + 18:80109031-80140351 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000262198
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000262198 2.830±0.00 5.773±0.00 2.310±0.03 1.000±0.32 0.789±0.09 0.602±0.40 1.490±0.22 0.856±0.00 1.269±0.62 0.262±0.06 3.032±2.06 1.864±0.88 6.428±3.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007Y9 CIL_0007Y9_0001 VISTA 18:79552100-80156263
CIL_000013 CIL_000013_0002 CGP 18:80034358-80147523
CIL_000014 CIL_000014_0002 CGP 18:80109031-80247546

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003677 IEA DNA binding
GO:0005515 IPI protein binding
GO:0005575 ND cellular_component
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0030182 ISS neuron differentiation
GO:0030307 ISS positive regulation of cell growth
GO:0034599 ISS cellular response to oxidative stress
GO:0046872 IEA metal ion binding
GO:0060548 ISS negative regulation of cell death
GO:0071300 ISS cellular response to retinoic acid

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000066743 Adnp2-001 protein_coding Mus_musculus 0 1441
ENSMUST00000160327 Gm16270-001 transcribed_processed_pseudogene Mus_musculus 0 449

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