C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Ral GTPase activating protein, beta subunit (non-catalytic)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000262879 RALGAPB-001 ENSG00000170471 9606 + 20:38472816-38578861 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastHeartKidneyMuscleOvaryTestisENST00000262879
Transcript ID Adipose Brain Breast Heart Kidney Muscle Ovary Testis
ENST00000262879 0.798±0.00 1.219±0.00 2.284±0.00 2.708±0.00 2.898±0.00 0.809±0.00 1.110±0.00 6.389±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081Y CIL_00081Y_0001 VISTA 20:38219747-38821106
CIL_0004O2 CIL_0004O2_0001 CGP 20:38472816-38588463

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005096 IEA GTPase activator activity
GO:0005488 IEA binding
GO:0017123 ISS Ral GTPase activator activity
GO:0032484 IEA Ral protein signal transduction
GO:0032859 ISS activation of Ral GTPase activity
GO:0032880 IEA regulation of protein localization
GO:0046982 ISS protein heterodimerization activity
GO:0051056 IEA regulation of small GTPase mediated signal transduction
GO:0060178 IEA regulation of exocyst localization
GO:0061024 TAS membrane organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109486 Ralgapb-001 protein_coding Mus_musculus 0 6988
ENSMUST00000046274 Ralgapb-201 protein_coding Mus_musculus 0 6907
ENSMUST00000109485 Ralgapb-009 protein_coding Mus_musculus 0 4693
ENSMUST00000141497 Ralgapb-002 protein_coding Mus_musculus 0 4261
ENSMUST00000143394 Ralgapb-006 retained_intron Mus_musculus 0 2250
ENSMUST00000173137 Ralgapb-007 processed_transcript Mus_musculus 0 2244
ENSMUST00000150789 Ralgapb-005 retained_intron Mus_musculus 0 817
ENSMUST00000150420 Ralgapb-004 retained_intron Mus_musculus 0 558
ENSMUST00000173458 Ralgapb-008 processed_transcript Mus_musculus 0 244

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