C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000284136 SEMA3D-001 ENSG00000153993 9606 - 7:84995553-85121935 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000284136
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000284136 0.306±0.00 2.380±0.00 0.474±0.00 0.175±0.00 0.267±0.02 0.605±0.05 0.096±0.01 0.546±0.10 1.265±1.20 1.235±0.00 0.032±0.00 0.237±0.22 0.084±0.01 1.999±1.69

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PY CIL_0008PY_0001 VISTA 7:84764651-85368525

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004872 IEA receptor activity
GO:0005515 IEA protein binding
GO:0005576 IEA extracellular region
GO:0007275 IEA multicellular organismal development
GO:0007399 IEA nervous system development
GO:0016020 IEA membrane
GO:0030154 IEA cell differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000030868 Sema3d-201 protein_coding Mus_musculus 0 3027

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