C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tripartite motif containing 44
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000299413 TRIM44-001 ENSG00000166326 9606 + 11:35662805-35818007 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000299413
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000299413 2.172±0.00 6.576±0.00 2.236±0.00 12.947±0.00 4.598±1.08 1.861±0.39 1.003±0.00 2.572±0.58 3.285±0.46 1.293±0.67 1.483±1.19 4.481±2.08 5.126±5.61 5.619±0.58

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008ZW CIL_0008ZW_0001 VISTA 11:35486453-36089359
CIL_0004KV CIL_0004KV_0002 CGP 11:35662805-36232136

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0008270 IEA zinc ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102573 Trim44-001 protein_coding Mus_musculus 0 1633
ENSMUST00000144110 Trim44-003 protein_coding Mus_musculus 0 433
ENSMUST00000152929 Trim44-002 protein_coding Mus_musculus 0 414

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