C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc and ring finger 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000323037 ZNRF2-001 ENSG00000180233 9606 + 7:30284307-30367692 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000323037
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000323037 3.715±0.00 1.648±0.00 6.235±0.00 2.234±0.79 6.000±2.80 8.999±4.02 1.286±0.52 9.045±0.19 5.539±0.48 2.675±0.12 1.476±1.20 3.153±2.11 4.361±2.49 24.521±11.80

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006I3 CIL_0006I3_0002 CGP 7:30284307-30478784

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0005515 IEA protein binding
GO:0005737 IDA cytoplasm
GO:0005764 IEA lysosome
GO:0005768 IEA endosome
GO:0005886 IDA plasma membrane
GO:0008270 IEA zinc ion binding
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0030054 IEA cell junction
GO:0030659 IDA cytoplasmic vesicle membrane
GO:0043234 IPI protein complex
GO:0045202 IEA synapse
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000079869 Znrf2-001 protein_coding Mus_musculus 0 752
ENSMUST00000127331 Znrf2-003 protein_coding Mus_musculus 0 403
ENSMUST00000148425 Znrf2-002 processed_transcript Mus_musculus 0 248

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