C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: component of oligomeric golgi complex 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000323786 COG4-001 ENSG00000103051 9606 - 16:70480569-70523565 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000323786
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000323786 10.340±0.00 10.201±0.00 7.276±4.27 16.282±0.00 12.814±0.00 6.864±5.32 11.216±0.00 9.535±0.00 4.072±3.36 15.041±10.27 14.734±3.02 18.463±3.12 13.769±5.55

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0006890 IMP retrograde vesicle-mediated transport, Golgi to ER
GO:0007030 IMP Golgi organization
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0017119 IDA Golgi transport complex
GO:0048213 IMP Golgi vesicle prefusion complex stabilization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034203 Cog4-001 protein_coding Mus_musculus 0 3035
ENSMUST00000165867 Cog4-005 protein_coding Mus_musculus 0 2889
ENSMUST00000174398 Cog4-003 protein_coding Mus_musculus 0 2095
ENSMUST00000173501 Cog4-004 retained_intron Mus_musculus 0 863
ENSMUST00000172542 Cog4-002 nonsense_mediated_decay Mus_musculus 0 833
ENSMUST00000174679 Cog4-009 protein_coding Mus_musculus 0 678
ENSMUST00000172897 Cog4-007 nonsense_mediated_decay Mus_musculus 0 636
ENSMUST00000174165 Cog4-008 nonsense_mediated_decay Mus_musculus 0 505
ENSMUST00000174723 Cog4-011 nonsense_mediated_decay Mus_musculus 0 420
ENSMUST00000174800 Cog4-014 processed_transcript Mus_musculus 0 411
ENSMUST00000172668 Cog4-010 protein_coding Mus_musculus 0 274
ENSMUST00000174702 Cog4-006 retained_intron Mus_musculus 0 270
ENSMUST00000173794 Cog4-013 retained_intron Mus_musculus 2e-34 152

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