C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: signal-regulatory protein alpha
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000356025 SIRPA-002 ENSG00000198053 9606 + 20:1894783-1939897 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000356025
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000356025 10.394±0.00 20.145±0.00 1.208±0.00 31.101±20.16 8.849±6.09 5.709±4.26 1.368±0.69 7.569±4.50 14.667±0.00 0.609±0.00 1.171±0.00 8.180±5.14 12.869±2.46 5.089±3.31

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005H7 CIL_0005H7_0001 CGP 20:1629152-1940592
CIL_0005HA CIL_0005HA_0001 CGP 20:1894167-1994285

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005886 TAS plasma membrane
GO:0007155 TAS cell adhesion
GO:0007596 TAS blood coagulation
GO:0016020 TAS membrane
GO:0016021 IEA integral component of membrane
GO:0017124 IEA SH3 domain binding
GO:0050900 TAS leukocyte migration
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000179001 Sirpa-202 protein_coding Mus_musculus 0 778
ENSMUST00000103202 Sirpa-006 protein_coding Mus_musculus 0 778
ENSMUST00000103203 Sirpa-001 protein_coding Mus_musculus 0 776
ENSMUST00000049262 Sirpa-009 protein_coding Mus_musculus 0 723
ENSMUST00000161620 Sirpa-008 protein_coding Mus_musculus 0 723
ENSMUST00000163034 Sirpa-010 protein_coding Mus_musculus 0 315
ENSMUST00000160276 Sirpa-007 protein_coding Mus_musculus 0 279
ENSMUST00000099113 Sirpa-201 protein_coding Mus_musculus 0 259
ENSMUST00000099201 Sirpb1a-201 protein_coding Mus_musculus 0 252
ENSMUST00000160952 Sirpa-011 processed_transcript Mus_musculus 3e-24 115

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