C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: signal-regulatory protein alpha
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000358771 SIRPA-001 ENSG00000198053 9606 + 20:1895296-1939897 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonKidneyLiverENST00000358771
Transcript ID Brain Breast Colon Kidney Liver
ENST00000358771 6.528±2.25 2.317±0.00 2.487±0.00 2.642±0.00 1.091±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005H7 CIL_0005H7_0001 CGP 20:1629152-1940592
CIL_0005HA CIL_0005HA_0001 CGP 20:1894167-1994285

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005886 TAS plasma membrane
GO:0007155 TAS cell adhesion
GO:0007596 TAS blood coagulation
GO:0016020 TAS membrane
GO:0016021 IEA integral component of membrane
GO:0017124 IEA SH3 domain binding
GO:0050900 TAS leukocyte migration
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000103202 Sirpa-006 protein_coding Mus_musculus 0 839
ENSMUST00000179001 Sirpa-202 protein_coding Mus_musculus 0 784
ENSMUST00000103203 Sirpa-001 protein_coding Mus_musculus 0 776
ENSMUST00000049262 Sirpa-009 protein_coding Mus_musculus 0 767
ENSMUST00000161620 Sirpa-008 protein_coding Mus_musculus 0 728
ENSMUST00000163034 Sirpa-010 protein_coding Mus_musculus 0 315
ENSMUST00000160276 Sirpa-007 protein_coding Mus_musculus 0 279
ENSMUST00000099113 Sirpa-201 protein_coding Mus_musculus 0 259
ENSMUST00000099201 Sirpb1a-201 protein_coding Mus_musculus 0 252
ENSMUST00000160952 Sirpa-011 processed_transcript Mus_musculus 2e-37 159

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