C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: prefoldin subunit 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000368010 PFDN2-001 ENSG00000143256 9606 - 1:161100556-161118111 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000368010
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000368010 69.033±0.00 76.282±0.00 2.349±0.00 50.502±37.88 25.229±20.29 44.838±39.86 18.028±14.15 31.559±20.71 21.452±15.50 43.149±40.69 31.632±24.10 74.850±40.55 51.534±10.91 100.978±8.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000CT CIL_0000CT_0002 CGP 1:161100556-161125445

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0005739 IDA mitochondrion
GO:0005794 IDA Golgi apparatus
GO:0006457 NAS:IEA protein folding
GO:0016272 NAS:IEA prefoldin complex
GO:0044267 TAS cellular protein metabolic process
GO:0051082 NAS:IEA unfolded protein binding
GO:0051084 TAS 'de novo' posttranslational protein folding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000135941 Pfdn2-001 protein_coding Mus_musculus 0 750
ENSMUST00000138323 Pfdn2-003 processed_transcript Mus_musculus 0 472
ENSMUST00000006579 Pfdn2-002 protein_coding Mus_musculus 0 368

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