C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger, DHHC-type containing 18
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000374142 ZDHHC18-001 ENSG00000204160 9606 + 1:26826710-26857601 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000374142
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000374142 2.868±0.00 1.550±0.00 2.350±0.36 6.273±0.00 2.041±0.00 1.778±0.00 0.545±0.00 8.018±0.00 0.812±0.00 4.120±3.97 9.174±0.00 4.572±1.44

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007T4 CIL_0007T4_0001 VISTA 1:26423129-27024414

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005794 IDA Golgi apparatus
GO:0008152 IEA metabolic process
GO:0008270 IEA zinc ion binding
GO:0016021 IEA integral component of membrane
GO:0016409 IDA palmitoyltransferase activity
GO:0018345 IDA protein palmitoylation
GO:0019706 IEA protein-cysteine S-palmitoyltransferase activity
GO:0034613 IEA cellular protein localization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000084238 Zdhhc18-001 protein_coding Mus_musculus 0 1657
ENSMUST00000135999 Zdhhc18-002 retained_intron Mus_musculus 0 857
ENSMUST00000138639 Zdhhc18-004 retained_intron Mus_musculus 0 431
ENSMUST00000142382 Zdhhc18-005 processed_transcript Mus_musculus 0 353
ENSDART00000130540 zdhhc18a-201 protein_coding Danio_rerio 0 231
ENSDART00000101885 zdhhc18a-001 protein_coding Danio_rerio 0 231
ENSMUST00000146464 Zdhhc18-003 processed_transcript Mus_musculus 5e-22 111

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