C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ADAM metallopeptidase with thrombospondin type 1 motif, 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000388820 ADAMTS7-001 ENSG00000136378 9606 - 15:78759203-78811431 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000388820
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000388820 2.081±0.00 1.140±0.00 1.047±0.00 0.184±0.17 1.587±1.34 0.167±0.00 0.067±0.00 1.343±0.00 0.114±0.00 2.362±0.56 3.510±2.11 1.395±0.52

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004222 IDA:IEA metalloendopeptidase activity
GO:0005515 IPI protein binding
GO:0005578 IEA proteinaceous extracellular matrix
GO:0006508 IEA proteolysis
GO:0008233 IEA peptidase activity
GO:0008237 TAS metallopeptidase activity
GO:0008270 IEA zinc ion binding
GO:0009986 IEA cell surface
GO:0031012 IEA extracellular matrix
GO:0032331 IDA negative regulation of chondrocyte differentiation
GO:0051603 IMP proteolysis involved in cellular protein catabolic process
GO:0071347 IMP cellular response to interleukin-1
GO:0071356 IMP cellular response to tumor necrosis factor
GO:0071773 IDA cellular response to BMP stimulus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000167122 Adamts7-008 protein_coding Mus_musculus 0 2433
ENSMUST00000113059 Adamts7-001 protein_coding Mus_musculus 0 2433
ENSMUST00000113060 Adamts7-003 protein_coding Mus_musculus 0 2215
ENSMUST00000147250 Adamts7-010 protein_coding Mus_musculus 0 2215
ENSMUST00000134996 Adamts7-002 nonsense_mediated_decay Mus_musculus 0 1188
ENSMUST00000144943 Adamts7-005 retained_intron Mus_musculus 0 568
ENSMUST00000124441 Adamts7-004 retained_intron Mus_musculus 0 556
ENSMUST00000138227 Adamts7-006 processed_transcript Mus_musculus 0 231

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