C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: bromodomain containing 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000402931 BRD8-006 ENSG00000112983 9606 - 5:138156882-138178633 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastHeartLiverLungOvaryPlacentaENST00000402931
Transcript ID Breast Heart Liver Lung Ovary Placenta
ENST00000402931 1.255±0.00 1.362±0.73 2.847±0.00 2.064±0.00 4.449±2.05 7.861±1.77

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005P9 CIL_0005P9_0001 CGP 5:138139766-138187715

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005634 IDA nucleus
GO:0005739 IDA mitochondrion

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000097626 Brd8-003 protein_coding Mus_musculus 0 3555
ENSMUST00000003876 Brd8-001 protein_coding Mus_musculus 0 2686
ENSMUST00000115765 Brd8-008 protein_coding Mus_musculus 0 2569
ENSMUST00000115766 Brd8-002 protein_coding Mus_musculus 0 2211
ENSMUST00000152612 Brd8-004 retained_intron Mus_musculus 0 1332
ENSMUST00000153569 Brd8-005 retained_intron Mus_musculus 0 691
ENSMUST00000145431 Brd8-006 processed_transcript Mus_musculus 0 675

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