C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: POTE ankyrin domain family, member F
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000409914 POTEF-001 ENSG00000196604 9606 - 2:130074030-130129222 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyMuscleOvaryPlacentaTestisENST00000409914
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Muscle Ovary Placenta Testis
ENST00000409914 0.026±0.00 0.004±0.00 0.016±0.00 0.014±0.00 0.004±0.00 0.004±0.00 0.014±0.00 0.051±0.05 0.026±0.01 0.291±0.21

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001895 IEP retina homeostasis
GO:0005515 IEA protein binding
GO:0005615 IDA extracellular space
GO:0005737 IEA cytoplasm
GO:0070062 IDA extracellular vesicular exosome
GO:0072562 IDA blood microparticle

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000100497 Actb-001 protein_coding Mus_musculus 0 1424
ENSMUST00000106215 Actg1-201 protein_coding Mus_musculus 0 1227
ENSMUST00000071555 Actg1-001 protein_coding Mus_musculus 0 1227
ENSMUST00000121430 Gm12715-001 processed_pseudogene Mus_musculus 0 1208
ENSMUST00000082300 Gm8399-201 pseudogene Mus_musculus 0 1149
ENSDART00000054987 actb1-001 protein_coding Danio_rerio 0 1122
ENSMUST00000078717 Lrrc58-001 protein_coding Mus_musculus 0 1118
ENSMUST00000034453 Acta1-201 protein_coding Mus_musculus 0 1037
ENSMUST00000119947 Gm15725-001 transcribed_processed_pseudogene Mus_musculus 0 1035
ENSMUST00000167721 Actb-002 protein_coding Mus_musculus 0 996
ENSMUST00000171419 Actb-007 protein_coding Mus_musculus 0 959
ENSMUST00000120059 Gm5388-001 processed_pseudogene Mus_musculus 0 928
ENSDART00000055136 actc1b-201 protein_coding Danio_rerio 0 918
ENSMUST00000140208 Gm8464-002 processed_transcript Mus_musculus 0 913
ENSMUST00000152262 Gm4750-002 processed_transcript Mus_musculus 0 913
ENSDART00000058629 acta1b-001 protein_coding Danio_rerio 0 907
ENSMUST00000121731 Actg2-002 protein_coding Mus_musculus 0 904
ENSMUST00000075161 Actg2-001 protein_coding Mus_musculus 0 904
ENSDART00000133319 actb1-005 protein_coding Danio_rerio 0 902
ENSMUST00000090269 Actc1-001 protein_coding Mus_musculus 0 898
ENSDART00000062370 actc1a-001 protein_coding Danio_rerio 0 885
ENSMUST00000146697 Gm8464-001 transcribed_processed_pseudogene Mus_musculus 0 872
ENSMUST00000151942 Gm4750-001 transcribed_processed_pseudogene Mus_musculus 0 872
ENSDART00000114549 hm:zewp0073-201 protein_coding Danio_rerio 0 852
ENSDART00000052838 acta1a-001 protein_coding Danio_rerio 0 852
ENSMUST00000184255 Gm17087-001 translated_processed_pseudogene Mus_musculus 0 845
ENSDART00000066430 acta2-201 protein_coding Danio_rerio 0 806
ENSDART00000080664 protein_coding Danio_rerio 0 804
ENSMUST00000118518 Gm12003-001 processed_pseudogene Mus_musculus 0 780
ENSMUST00000131103 Actg1-002 nonsense_mediated_decay Mus_musculus 0 754
ENSDART00000149990 acta2-001 protein_coding Danio_rerio 0 754
ENSMUST00000119663 Gm4760-001 processed_pseudogene Mus_musculus 0 732
ENSDART00000138324 actb1-004 protein_coding Danio_rerio 0 671
ENSMUST00000119420 Gm4918-001 processed_pseudogene Mus_musculus 0 647
ENSMUST00000128055 Actg1-005 protein_coding Mus_musculus 0 643
ENSMUST00000141904 Actg2-005 protein_coding Mus_musculus 0 628
ENSMUST00000106216 Actb-006 protein_coding Mus_musculus 0 558
ENSMUST00000152029 Actg2-004 protein_coding Mus_musculus 0 477
ENSMUST00000167386 Actb-003 processed_transcript Mus_musculus 0 473
ENSMUST00000165629 Actb-008 retained_intron Mus_musculus 0 438
ENSMUST00000062147 Actg1-006 protein_coding Mus_musculus 0 427
ENSMUST00000184183 Gm17087-002 protein_coding Mus_musculus 0 392
ENSMUST00000156343 Actg1-004 retained_intron Mus_musculus 0 387
ENSMUST00000141406 Actg1-007 retained_intron Mus_musculus 0 383
ENSMUST00000165006 Gm17228-001 processed_pseudogene Mus_musculus 0 372
ENSDART00000135318 actb1-006 retained_intron Danio_rerio 0 320
ENSDART00000141407 actb1-002 protein_coding Danio_rerio 0 320
ENSMUST00000164765 Actb-005 retained_intron Mus_musculus 0 296
ENSMUST00000163829 Actb-004 protein_coding Mus_musculus 0 224
ENSMUST00000124933 Actg2-006 processed_transcript Mus_musculus 0 204
ENSMUST00000144868 Actg1-003 retained_intron Mus_musculus 4.99997e-41 174
ENSMUST00000089616 Actg1-009 protein_coding Mus_musculus 4e-27 128

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