C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heparan sulfate (glucosamine) 3-O-sulfotransferase 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000411826 HS3ST5-201 ENSG00000249853 9606 - 6:114055586-114062877 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartKidneyMuscleOvaryPlacentaENST00000411826
Transcript ID Brain Colon Heart Kidney Muscle Ovary Placenta
ENST00000411826 0.464±0.24 0.076±0.01 0.029±0.03 0.108±0.00 0.187±0.14 0.039±0.00 0.013±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007P5 CIL_0007P5_0009 UCNEbase 6:113887002-114451190

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0005515 IPI protein binding
GO:0005975 TAS carbohydrate metabolic process
GO:0006024 TAS glycosaminoglycan biosynthetic process
GO:0006477 IDA protein sulfation
GO:0008146 IEA sulfotransferase activity
GO:0008467 IDA [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity
GO:0015015 IDA heparan sulfate proteoglycan biosynthetic process, enzymatic modification
GO:0016021 NAS integral component of membrane
GO:0030203 TAS glycosaminoglycan metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0046596 IDA regulation of viral entry into host cell
GO:0050656 NAS 3'-phosphoadenosine 5'-phosphosulfate binding
GO:0050819 IDA negative regulation of coagulation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000168572 Hs3st5-004 protein_coding Mus_musculus 0 1650
ENSMUST00000058738 Hs3st5-001 protein_coding Mus_musculus 0 1650
ENSMUST00000167191 Hs3st5-002 protein_coding Mus_musculus 0 1602

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