C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: interferon-induced protein 35
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000415816 IFI35-002 ENSG00000068079 9606 + 17:43006725-43014456 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonLiverLungOvaryPlacentaTestisENST00000415816
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Liver Lung Ovary Placenta Testis
ENST00000415816 5.774±0.00 14.668±0.00 0.926±0.00 1.467±0.00 9.234±0.00 9.648±0.00 0.493±0.00 12.401±0.00 15.092±2.29 8.122±1.34 1.819±0.29

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00063T CIL_00063T_0001 CGP 17:43006725-43025123

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005829 TAS cytosol
GO:0019221 TAS cytokine-mediated signaling pathway
GO:0060337 TAS type I interferon signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000010502 Ifi35-001 protein_coding Mus_musculus 0 595
ENSMUST00000131024 Ifi35-003 nonsense_mediated_decay Mus_musculus 0 292
ENSMUST00000125958 Ifi35-002 retained_intron Mus_musculus 0 228

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