C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heterogeneous nuclear ribonucleoprotein L pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000421896 HNRNPLP1-001 ENSG00000233503 9606 - 6:7481094-7482594 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLiverMuscleTestisENST00000421896
Transcript ID Adipose Adrenal Breast Colon Kidney Liver Muscle Testis
ENST00000421896 0.012±0.00 0.013±0.00 0.070±0.06 0.013±0.00 0.013±0.00 0.044±0.03 0.045±0.00 0.024±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007T6 CIL_0007T6_0001 VISTA 6:7260927-7862502
CIL_00037Y CIL_00037Y_0001 CGP 6:7389496-7586717

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000038572 Hnrnpl-201 protein_coding Mus_musculus 0 1616
ENSMUST00000172529 Hnrnpl-003 protein_coding Mus_musculus 0 1616
ENSMUST00000174548 Hnrnpl-001 protein_coding Mus_musculus 0 1616
ENSMUST00000174882 Hnrnpl-006 nonsense_mediated_decay Mus_musculus 0 948
ENSMUST00000174477 Hnrnpl-004 protein_coding Mus_musculus 0 837
ENSMUST00000174526 Hnrnpl-007 retained_intron Mus_musculus 6.00036e-42 176

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