C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: calcium channel, voltage-dependent, alpha 2/delta subunit 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000424201 CACNA2D2-001 ENSG00000007402 9606 - 3:50362892-50503423 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverLungTestisENST00000424201
Transcript ID Brain Heart Kidney Liver Lung Testis
ENST00000424201 4.374±0.00 0.123±0.00 4.639±0.00 0.253±0.00 5.405±2.68 5.923±1.99

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008D8 CIL_0008D8_0001 VISTA 3:50299047-50902727

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005886 TAS plasma membrane
GO:0006112 TAS energy reserve metabolic process
GO:0034765 IEA regulation of ion transmembrane transport
GO:0044281 TAS small molecule metabolic process
GO:0046872 IEA metal ion binding
GO:0050796 TAS regulation of insulin secretion
GO:0070588 IEA calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000010210 Cacna2d2-005 protein_coding Mus_musculus 0 4612
ENSMUST00000170737 Cacna2d2-003 protein_coding Mus_musculus 0 4584
ENSMUST00000085092 Cacna2d2-002 protein_coding Mus_musculus 0 4529
ENSMUST00000168532 Cacna2d2-001 protein_coding Mus_musculus 0 4501
ENSMUST00000164988 Cacna2d2-201 protein_coding Mus_musculus 0 4486
ENSMUST00000166799 Cacna2d2-006 protein_coding Mus_musculus 0 4466
ENSMUST00000171809 Cacna2d2-007 processed_transcript Mus_musculus 0 778
ENSMUST00000169354 Cacna2d2-009 processed_transcript Mus_musculus 0 776
ENSMUST00000168959 Cacna2d2-008 retained_intron Mus_musculus 0 603

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