C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pannexin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000436171 PANX1-002 ENSG00000110218 9606 + 11:94128929-94181966 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastKidneyLiverENST00000436171
Transcript ID Adrenal Breast Kidney Liver
ENST00000436171 1.905±0.00 0.610±0.00 1.041±0.00 0.893±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002C1 CIL_0002C1_0002 CGP 11:94021361-94181972

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005102 IPI receptor binding
GO:0005262 IMP calcium channel activity
GO:0005783 IDA endoplasmic reticulum
GO:0005886 IDA plasma membrane
GO:0005921 IEA gap junction
GO:0006812 IDA cation transport
GO:0006816 IMP calcium ion transport
GO:0007268 TAS synaptic transmission
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0022840 IMP leak channel activity
GO:0032059 IDA bleb
GO:0034214 IDA protein hexamerization
GO:0035872 TAS nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway
GO:0045087 TAS innate immune response
GO:0050718 IDA positive regulation of interleukin-1 beta secretion
GO:0055077 IDA gap junction hemi-channel activity
GO:0070588 IEA calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000164273 Panx1-001 protein_coding Mus_musculus 0 1219
ENSMUST00000056755 Panx1-002 nonsense_mediated_decay Mus_musculus 0 617
ENSMUST00000169288 Panx1-004 protein_coding Mus_musculus 0 364
ENSMUST00000166933 Panx1-003 retained_intron Mus_musculus 0 298

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