C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Ral GTPase activating protein, beta subunit (non-catalytic)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000438490 RALGAPB-008 ENSG00000170471 9606 + 20:38497480-38575070 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000438490
Transcript ID Bladder Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000438490 1.419±0.00 5.322±0.00 3.894±0.00 1.098±0.28 1.571±0.00 2.135±0.08 1.311±0.64 5.078±0.00 5.023±0.00 11.257±7.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081Y CIL_00081Y_0001 VISTA 20:38219747-38821106
CIL_0004O2 CIL_0004O2_0001 CGP 20:38472816-38588463

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005096 IEA GTPase activator activity
GO:0005488 IEA binding
GO:0043547 IEA positive regulation of GTPase activity
GO:0051056 IEA regulation of small GTPase mediated signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109486 Ralgapb-001 protein_coding Mus_musculus 0 5709
ENSMUST00000046274 Ralgapb-201 protein_coding Mus_musculus 0 5631
ENSMUST00000109485 Ralgapb-009 protein_coding Mus_musculus 0 4444
ENSMUST00000141497 Ralgapb-002 protein_coding Mus_musculus 0 4012
ENSMUST00000173137 Ralgapb-007 processed_transcript Mus_musculus 0 1266
ENSMUST00000143394 Ralgapb-006 retained_intron Mus_musculus 0 1266
ENSMUST00000150420 Ralgapb-004 retained_intron Mus_musculus 0 558
ENSMUST00000173458 Ralgapb-008 processed_transcript Mus_musculus 0 244

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