C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 8 pseudogene 13
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000463294 KRT8P13-001 ENSG00000241416 9606 + 3:170495627-170496636 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000463294
Transcript ID Adipose Adrenal Brain Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000463294 0.171±0.00 0.021±0.00 0.534±0.44 0.063±0.00 0.048±0.03 0.035±0.01 0.040±0.00 0.115±0.00 0.337±0.18 0.313±0.00 1.341±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002Z6 CIL_0002Z6_0001 CGP 3:170357678-170860380
CIL_0002Z5 CIL_0002Z5_0001 CGP 3:170418865-170860380

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023952 Krt8-201 protein_coding Mus_musculus 0 1061
ENSMUST00000023714 4732456N10Rik-001 protein_coding Mus_musculus 0 494
ENSMUST00000023709 Krt5-001 protein_coding Mus_musculus 0 479
ENSMUST00000023786 Krt6b-201 protein_coding Mus_musculus 0 339
ENSMUST00000023788 Krt6a-201 protein_coding Mus_musculus 0 333
ENSMUST00000042957 Krt75-001 protein_coding Mus_musculus 0 311
ENSMUST00000023797 Krt4-201 protein_coding Mus_musculus 0 274
ENSMUST00000023710 Krt71-001 protein_coding Mus_musculus 0 252
ENSMUST00000100179 Krt76-001 protein_coding Mus_musculus 0 244
ENSMUST00000023799 Krt79-001 protein_coding Mus_musculus 0 233
ENSMUST00000071104 Krt72-001 protein_coding Mus_musculus 0 231
ENSMUST00000127671 Krt72-002 processed_transcript Mus_musculus 6e-40 169
ENSMUST00000100184 Gm5478-201 protein_coding Mus_musculus 2e-35 154
ENSMUST00000087996 Krt77-001 protein_coding Mus_musculus 1e-32 145
ENSMUST00000023720 Krt84-201 protein_coding Mus_musculus 8e-29 132
ENSDART00000009438 lmnb2-001 protein_coding Danio_rerio 3e-23 113
ENSMUST00000148248 Vim-004 retained_intron Mus_musculus 2e-19 100
ENSMUST00000028062 Vim-001 protein_coding Mus_musculus 2e-19 100
ENSMUST00000023790 Krt1-201 protein_coding Mus_musculus 1e-17 95

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