C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier organic anion transporter family, member 1A2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000480394 SLCO1A2-004 ENSG00000084453 9606 - 12:21273942-21324681 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyLiverPlacentaENST00000480394
Transcript ID Brain Kidney Liver Placenta
ENST00000480394 2.901±0.00 2.582±0.00 0.050±0.00 0.023±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005PW CIL_0005PW_0001 CGP 12:21131202-21419594
CIL_0005PZ CIL_0005PZ_0001 CGP 12:21264600-21419594

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000111822 Slco1a5-003 retained_intron Mus_musculus 0 955
ENSMUST00000032364 Slco1a4-201 protein_coding Mus_musculus 0 946
ENSMUST00000165990 Slco1a4-001 protein_coding Mus_musculus 0 946
ENSMUST00000081380 Slco1a5-001 protein_coding Mus_musculus 0 935
ENSMUST00000111825 Slco1a5-002 protein_coding Mus_musculus 0 935
ENSMUST00000042119 Slco1a1-001 protein_coding Mus_musculus 0 828
ENSMUST00000168119 Slco1a1-002 protein_coding Mus_musculus 0 828
ENSMUST00000111832 Gm6614-201 protein_coding Mus_musculus 0 763
ENSMUST00000181628 Gm6614-002 protein_coding Mus_musculus 0 763
ENSMUST00000181791 Gm6614-001 protein_coding Mus_musculus 0 763
ENSMUST00000171651 Slco1a1-003 retained_intron Mus_musculus 0 654
ENSMUST00000128446 Slco1a5-005 protein_coding Mus_musculus 0 501

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