C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: WD repeat domain 82
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000487402 WDR82-002 ENSG00000164091 9606 - 3:52254960-52268138 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleENST00000487402
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle
ENST00000487402 3.063±0.00 6.843±0.00 6.149±0.00 4.163±0.00 1.535±0.00 3.377±0.00 3.793±0.00 3.395±0.00 3.290±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00087C CIL_00087C_0001 VISTA 3:51705330-52307529
CIL_0008NT CIL_0008NT_0001 VISTA 3:51738719-52342071
CIL_0007WP CIL_0007WP_0001 VISTA 3:52127966-52731115

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000020490 Wdr82-001 protein_coding Mus_musculus 0 1661
ENSMUST00000190564 Wdr82-002 nonsense_mediated_decay Mus_musculus 0 601

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