C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glutamyl-tRNA(Gln) amidotransferase, subunit B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000503160 GATB-005 ENSG00000059691 9606 - 4:151670863-151760930 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000503160
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000503160 1.845±0.00 3.263±0.00 5.635±0.00 2.127±0.00 1.082±0.00 3.253±0.00 4.495±0.00 3.824±0.00 1.257±0.00 1.849±0.00 1.740±0.33 2.910±0.72 2.888±0.43

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000OB CIL_0000OB_0002 CGP 4:151409216-151761023

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016874 IEA ligase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029726 Pet112-002 processed_transcript Mus_musculus 0 1744
ENSMUST00000127348 Pet112-001 protein_coding Mus_musculus 0 1284
ENSMUST00000107674 Pet112-004 protein_coding Mus_musculus 0 1160
ENSMUST00000107672 Pet112-003 protein_coding Mus_musculus 0 1068
ENSMUST00000134273 Pet112-005 processed_transcript Mus_musculus 0 303

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