C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | short coiled-coil protein | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000512749  |
SCOC-006 |
ENSG00000153130 |
9606 | + |
4:140373474-140381575  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_00046O | CIL_00046O_0002 | CGP | 4:139716753-140385726 |
| CIL_0006MV | CIL_0006MV_0002 | CGP | 4:140257286-140427968 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005515 | IPI | protein binding |
| GO:0005768 | IDA | endosome |
| GO:0005802 | IDA | trans-Golgi network |
| GO:0016020 | IEA | membrane |
| GO:0016239 | IDA | positive regulation of macroautophagy |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000167525
|
Scoc-202 | protein_coding | Mus_musculus | 0 | 597 |
|
ENSMUST00000081506
|
Scoc-201 | protein_coding | Mus_musculus | 0 | 597 |
|
ENSMUST00000172475
|
Gm7335-001 | processed_pseudogene | Mus_musculus | 0 | 385 |
