C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transient receptor potential cation channel, subfamily C, member 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000513531 TRPC3-005 ENSG00000138741 9606 - 4:121879736-121933038 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalHeartKidneyOvaryPlacentaTestisENST00000513531
Transcript ID Adrenal Heart Kidney Ovary Placenta Testis
ENST00000513531 0.012±0.00 0.013±0.00 0.082±0.04 0.042±0.00 0.145±0.10 0.128±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007AB CIL_0007AB_0001 CGP 4:121824440-121951754
CIL_0007AC CIL_0007AC_0001 CGP 4:121879027-122362758

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005216 IEA ion channel activity
GO:0005262 IEA calcium channel activity
GO:0005488 IEA binding
GO:0005515 IEA protein binding
GO:0006811 IEA ion transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0055085 IEA transmembrane transport
GO:0070588 IEA calcium ion transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029271 Trpc3-001 protein_coding Mus_musculus 0 1792
ENSMUST00000146475 Trpc3-002 processed_transcript Mus_musculus 0 756
ENSMUST00000133542 Trpc3-005 retained_intron Mus_musculus 0 318

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