C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: Treacher Collins-Franceschetti syndrome 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000515516 TCOF1-011 ENSG00000070814 9606 + 5:150357783-150399881 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonOvaryPlacentaTestisENST00000515516
Transcript ID Colon Ovary Placenta Testis
ENST00000515516 13.729±0.00 5.647±0.00 3.086±0.00 3.503±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00091Q CIL_00091Q_0001 VISTA 5:150006686-150608670

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000177172 Tcof1-004 protein_coding Mus_musculus 0 263
ENSMUST00000163446 Tcof1-003 nonsense_mediated_decay Mus_musculus 0 263
ENSMUST00000176630 Tcof1-001 protein_coding Mus_musculus 0 263
ENSMUST00000175934 Tcof1-005 protein_coding Mus_musculus 0 263
ENSMUST00000177343 Tcof1-007 protein_coding Mus_musculus 0 193

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