C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: small EDRK-rich factor 1B (centromeric)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000515588 SERF1B-007 ENSG00000205572 9606 + 5:70025534-70042008 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungMuscleOvaryPlacentaTestisENST00000515588
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Muscle Ovary Placenta Testis
ENST00000515588 0.125±0.00 0.099±0.00 0.370±0.02 0.270±0.10 0.334±0.00 0.100±0.00 0.102±0.00 0.015±0.00 0.217±0.00 0.139±0.00 0.062±0.00 0.147±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004ZD CIL_0004ZD_0002 CGP 5:70025247-70078522

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000152286 Serf1-005 protein_coding Mus_musculus 1e-36 158
ENSMUST00000151821 Serf1-004 protein_coding Mus_musculus 4e-36 156
ENSMUST00000129014 Serf1-006 protein_coding Mus_musculus 5e-35 152
ENSMUST00000132053 Serf1-002 protein_coding Mus_musculus 5e-35 152
ENSMUST00000022145 Serf1-001 protein_coding Mus_musculus 5e-35 152
ENSMUST00000142155 Serf1-003 protein_coding Mus_musculus 5e-35 152

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