C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CDC-like kinase 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000520957 CLK4-012 ENSG00000113240 9606 - 5:178621812-178627030 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonHeartKidneyLiverLungMuscleOvaryENST00000520957
Transcript ID Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary
ENST00000520957 4.334±0.00 2.750±0.00 5.048±0.00 1.754±0.00 2.916±0.00 2.189±0.00 6.082±0.00 1.300±0.00 1.988±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000XD CIL_0000XD_0002 CGP 5:178237618-178630615

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000133200 Clk4-010 retained_intron Mus_musculus 0 298
ENSMUST00000146776 Clk4-008 retained_intron Mus_musculus 0 287
ENSMUST00000148053 Clk4-007 nonsense_mediated_decay Mus_musculus 0 287
ENSMUST00000136587 Clk4-009 retained_intron Mus_musculus 0 287
ENSMUST00000126131 Clk4-006 nonsense_mediated_decay Mus_musculus 0 287
ENSMUST00000093132 Clk4-001 protein_coding Mus_musculus 0 287
ENSMUST00000153414 Clk4-002 nonsense_mediated_decay Mus_musculus 8e-26 122
ENSMUST00000130641 Clk4-005 protein_coding Mus_musculus 3e-25 121

Loading