C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RAB35, member RAS oncogene family
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000538903 RAB35-005 ENSG00000111737 9606 - 12:120097246-120116736 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonKidneyLungOvaryPlacentaENST00000538903
Transcript ID Colon Kidney Lung Ovary Placenta
ENST00000538903 1.664±0.00 2.218±0.00 1.693±0.00 9.032±7.25 17.416±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009CQ CIL_0009CQ_0001 VISTA 12:119991644-120595694

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 IEA GTPase activity
GO:0005525 IEA GTP binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006184 IEA GTP catabolic process
GO:0006886 IEA intracellular protein transport
GO:0006913 IEA nucleocytoplasmic transport
GO:0007165 IEA signal transduction
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000138885 Rab35-002 nonsense_mediated_decay Mus_musculus 0 483
ENSMUST00000031492 Rab35-001 protein_coding Mus_musculus 0 483
ENSMUST00000176533 Rab26-004 protein_coding Mus_musculus 0.00000000003 73
ENSMUST00000177441 Rab26-003 retained_intron Mus_musculus 0.00000000003 73
ENSMUST00000035797 Rab26-001 protein_coding Mus_musculus 0.00000000003 73
ENSMUST00000061764 Rab26-002 protein_coding Mus_musculus 0.00000000003 73

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