C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000558741 RP11-597K23.1-001 ENSG00000259622 9606 - 15:82010212-82010607 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyTestisENST00000558741
Transcript ID Kidney Testis
ENST00000558741 0.035±0.00 0.126±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00071F CIL_00071F_0002 CGP 15:81331217-82046141
CIL_0008DT CIL_0008DT_0001 VISTA 15:81587611-82189547

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000113627 Pin4-001 protein_coding Mus_musculus 0 538
ENSMUST00000154478 Gm6851-001 processed_pseudogene Mus_musculus 0 521
ENSMUST00000119052 Gm11196-001 processed_pseudogene Mus_musculus 0 520
ENSMUST00000144367 Pin4-002 processed_transcript Mus_musculus 0 499
ENSMUST00000122291 Gm14813-001 processed_pseudogene Mus_musculus 0 486
ENSMUST00000118147 Gm15460-001 processed_pseudogene Mus_musculus 0 462
ENSMUST00000121764 Gm15644-001 processed_pseudogene Mus_musculus 0 455

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