C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: component of oligomeric golgi complex 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000562200 COG4-015 ENSG00000103051 9606 - 16:70509872-70523540 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartLiverLungMuscleOvaryENST00000562200
Transcript ID Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary
ENST00000562200 3.519±0.00 3.574±0.00 5.303±0.00 7.785±0.00 4.651±0.00 6.402±0.00 3.844±0.00 10.412±0.00 5.311±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034203 Cog4-001 protein_coding Mus_musculus 0 1051
ENSMUST00000174398 Cog4-003 protein_coding Mus_musculus 0 1046
ENSMUST00000165867 Cog4-005 protein_coding Mus_musculus 0 905
ENSMUST00000174679 Cog4-009 protein_coding Mus_musculus 0 678
ENSMUST00000172897 Cog4-007 nonsense_mediated_decay Mus_musculus 0 636
ENSMUST00000174165 Cog4-008 nonsense_mediated_decay Mus_musculus 0 505
ENSMUST00000174723 Cog4-011 nonsense_mediated_decay Mus_musculus 0 420
ENSMUST00000174800 Cog4-014 processed_transcript Mus_musculus 0 411
ENSMUST00000172668 Cog4-010 protein_coding Mus_musculus 0 274
ENSMUST00000174702 Cog4-006 retained_intron Mus_musculus 0 270

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