C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: neuronal PAS domain protein 3b
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000015876 npas3b 7955 - 15:8494653-8591977 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000101511 npas3b-201 8494653-8568063 protein_coding
  ENSDART00000140213 npas3b-001 8499133-8591977 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000101511ENSDART00000140213
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000101511 4.311±1.08 0.057±0.06 0.053±0.00 0.020±0.00 0.124±0.00
ENSDART00000140213 N/A 0.010±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006BK CIL_0006BK_0001 CGP 15:8469241-8591977
CIL_00062F CIL_00062F_0001 CGP 15:8494653-8898422

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0004871 IEA signal transducer activity
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0007165 IEA signal transduction
GO:0046983 IEA protein dimerization activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000130751 NPAS1 neuronal PAS domain protein 1 protein_coding Homo_sapiens
ENSMUSG00000001988 Npas1 neuronal PAS domain protein 1 protein_coding Mus_musculus

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