C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: eukaryotic translation initiation factor 5A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000017235 eif5a 7955 - 24:27277902-27281947 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000009609 eif5a-001 27277902-27281843 protein_coding
  ENSDART00000113739 eif5a-002 27278924-27281947 protein_coding
  ENSDART00000125178 eif5a-201 27278410-27281876 protein_coding
  ENSDART00000133782 eif5a-004 27278958-27281865 protein_coding
  ENSDART00000135496 eif5a-005 27279051-27281700 protein_coding
  ENSDART00000140647 eif5a-006 27279244-27280900 protein_coding
  ENSDART00000141029 eif5a-003 27279514-27281910 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000009609ENSDART00000113739ENSDART00000125178ENSDART00000135496
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000009609 33.019±2.97 18.880±0.00 27.457±14.33 N/A N/A
ENSDART00000113739 N/A N/A 165.665±0.00 N/A N/A
ENSDART00000125178 71.063±23.58 227.979±13.62 129.136±104.19 140.773±0.00 191.327±0.00
ENSDART00000135496 68.671±0.00 144.310±10.57 150.032±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00049R CIL_00049R_0001 CGP 24:27271784-27281947

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0003743 IEA translation initiation factor activity
GO:0003746 IEA translation elongation factor activity
GO:0006412 IEA translation
GO:0006413 IEA translational initiation
GO:0006452 IEA translational frameshifting
GO:0008612 IEA peptidyl-lysine modification to hypusine
GO:0043022 IEA ribosome binding
GO:0045901 IEA positive regulation of translational elongation
GO:0045905 IEA positive regulation of translational termination

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000163577 EIF5A2 eukaryotic translation initiation factor 5A2 protein_coding Homo_sapiens
ENSMUSG00000050192 Eif5a2 eukaryotic translation initiation factor 5A2 protein_coding Mus_musculus

Loading