C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cytoplasmic linker associated protein 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000020345 clasp2 7955 + 19:44296650-44405093 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000039871 clasp2-201 44297006-44405090 protein_coding
  ENSDART00000076668 clasp2-202 44319337-44405090 protein_coding
  ENSDART00000102499 clasp2-203 44319337-44405090 protein_coding
  ENSDART00000133711 clasp2-005 44357677-44376486 protein_coding
  ENSDART00000136873 clasp2-002 44296650-44405093 protein_coding
  ENSDART00000138735 clasp2-006 44396160-44401201 retained_intron
  ENSDART00000139109 clasp2-004 44338006-44405093 protein_coding
  ENSDART00000144557 clasp2-001 44319337-44405093 protein_coding
  ENSDART00000150930 clasp2-010 44372836-44393298 protein_coding
  ENSDART00000151023 clasp2-009 44369502-44376374 retained_intron
  ENSDART00000151086 clasp2-008 44335483-44338080 processed_transcript
  ENSDART00000151378 clasp2-007 44364741-44367561 retained_intron

Danio rerio EnsemblZv9

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000076668ENSDART00000102499ENSDART00000136873ENSDART00000138735ENSDART00000139109ENSDART00000144557
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000076668 N/A N/A 0.094±0.00 N/A N/A
ENSDART00000102499 N/A N/A 0.094±0.00 N/A N/A
ENSDART00000136873 6.900±5.88 1.575±0.00 0.205±0.00 N/A N/A
ENSDART00000138735 N/A 0.701±0.15 0.199±0.00 N/A N/A
ENSDART00000139109 48.739±10.10 N/A 0.181±0.00 0.415±0.00 N/A
ENSDART00000144557 15.842±0.00 N/A 0.093±0.00 N/A 3.368±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003DD CIL_0003DD_0001 CGP 19:44296650-44444684

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000775 IEA chromosome, centromeric region
GO:0000776 IEA kinetochore
GO:0000777 IEA condensed chromosome kinetochore
GO:0005488 IEA binding
GO:0005515 IEA protein binding
GO:0005694 IEA chromosome
GO:0005737 IEA cytoplasm
GO:0005794 IEA Golgi apparatus
GO:0005802 ISS trans-Golgi network
GO:0005815 IEA microtubule organizing center
GO:0005819 IEA spindle
GO:0005856 IEA cytoskeleton
GO:0005874 ISS microtubule
GO:0007020 ISS microtubule nucleation
GO:0007049 IEA cell cycle
GO:0007067 IEA mitosis
GO:0031023 ISS microtubule organizing center organization
GO:0034453 ISS microtubule anchoring
GO:0051301 IEA cell division

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000163539 CLASP2 cytoplasmic linker associated protein 2 protein_coding Homo_sapiens
ENSMUSG00000033392 Clasp2 CLIP associating protein 2 protein_coding Mus_musculus

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