C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Hermansky-Pudlak syndrome 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000026170 hps1 7955 + 13:41298191-41328758 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000057047 hps1-001 41304862-41326472 protein_coding
  ENSDART00000109822 hps1-201 41306486-41328758 protein_coding
  ENSDART00000143506 hps1-002 41319146-41322314 retained_intron
  ENSDART00000146112 hps1-003 41298191-41308430 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000057047ENSDART00000109822ENSDART00000143506
Transcript ID Brain Heart Kidney Muscle
ENSDART00000057047 0.335±0.00 1.564±0.00 2.599±0.00 N/A
ENSDART00000109822 0.333±0.07 2.659±0.21 3.337±0.00 0.295±0.00
ENSDART00000143506 0.468±0.00 N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000107521 HPS1 Hermansky-Pudlak syndrome 1 protein_coding Homo_sapiens
ENSMUSG00000025188 Hps1 Hermansky-Pudlak syndrome 1 homolog (human) protein_coding Mus_musculus

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