C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: proteoglycan 4b
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000028163 prg4b 7955 + 20:34054428-34065203 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000030637 prg4b-201 34054510-34064228 protein_coding
  ENSDART00000113001 prg4b-202 34054657-34065203 protein_coding
  ENSDART00000134305 prg4b-002 34054444-34056585 protein_coding
  ENSDART00000143901 prg4b-001 34054428-34064246 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; HeartKidneyLiverENSDART00000113001ENSDART00000143901
Transcript ID Heart Kidney Liver
ENSDART00000113001 0.023±0.00 4.598±2.77 N/A
ENSDART00000143901 N/A 15.162±0.00 22.482±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001BO CIL_0001BO_0002 CGP 20:34054428-34094564

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005044 IEA scavenger receptor activity
GO:0006955 IEA immune response
GO:0030247 IEA polysaccharide binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000116690 PRG4 proteoglycan 4 protein_coding Homo_sapiens
ENSMUSG00000006014 Prg4 proteoglycan 4 (megakaryocyte stimulating factor, articular superficial zone protein) protein_coding Mus_musculus

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