C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nuclear receptor subfamily 1, group I, member 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000029766 nr1i2 7955 + 9:9724022-9786561 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000017326 nr1i2-201 9751228-9783151 protein_coding
  ENSDART00000061525 nr1i2-202 9724022-9784029 protein_coding
  ENSDART00000123247 nr1i2-203 9724287-9786561 protein_coding
  ENSDART00000125174 nr1i2-001 9724022-9784056 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000061525ENSDART00000123247ENSDART00000125174
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000061525 1.321±0.00 1.124±0.00 N/A N/A N/A
ENSDART00000123247 2.765±0.00 4.161±0.00 N/A 1.218±0.00 0.958±0.00
ENSDART00000125174 1.918±1.11 10.043±6.58 6.377±2.13 0.992±0.00 0.952±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005BS CIL_0005BS_0001 CGP 9:9662965-9786561
CIL_0005BP CIL_0005BP_0001 CGP 9:9724022-9892656

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000981 IDA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0003707 IEA steroid hormone receptor activity
GO:0004879 IDA ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IDA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0006357 IDA regulation of transcription from RNA polymerase II promoter
GO:0006366 IDA transcription from RNA polymerase II promoter
GO:0008270 IEA zinc ion binding
GO:0030522 IDA intracellular receptor signaling pathway
GO:0043401 IEA steroid hormone mediated signaling pathway
GO:0043565 IEA sequence-specific DNA binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000144852 NR1I2 nuclear receptor subfamily 1, group I, member 2 protein_coding Homo_sapiens
ENSMUSG00000022809 Nr1i2 nuclear receptor subfamily 1, group I, member 2 protein_coding Mus_musculus

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