C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SEC22 vesicle trafficking protein homolog B (S. cerevisiae), a
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000030108 sec22ba 7955 + 2:9759839-9772558 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000043499 sec22ba-001 9762584-9772558 protein_coding
  ENSDART00000153063 sec22ba-002 9759839-9771857 protein_coding
  ENSDART00000153323 sec22ba-003 9762778-9771850 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000043499ENSDART00000153063ENSDART00000153323
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000043499 4.528±2.41 7.916±3.36 7.007±0.59 0.844±0.00 5.306±0.00
ENSDART00000153063 N/A N/A 7.269±0.00 1.216±0.00 1.644±0.00
ENSDART00000153323 N/A 3.870±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001BM CIL_0001BM_0001 CGP 2:9735018-9760625

Gene Ontology
GO IDEvidence TypeGO Description
GO:0006810 IEA transport
GO:0016021 IEA integral to membrane
GO:0016192 IEA vesicle-mediated transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000265808 SEC22B SEC22 vesicle trafficking protein homolog B (S. cerevisiae) (gene/pseudogene) protein_coding Homo_sapiens
ENSMUSG00000027879 Sec22b SEC22 vesicle trafficking protein homolog B (S. cerevisiae) protein_coding Mus_musculus

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