C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: EFR3 homolog Ba (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000033516 efr3ba 7955 - 17:33438506-33495062 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000040346 efr3ba-201 33439420-33475914 protein_coding
  ENSDART00000135118 efr3ba-001 33438506-33495062 protein_coding
  ENSDART00000147305 efr3ba-002 33444075-33445044 processed_transcript

Danio rerio EnsemblZv9

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000040346ENSDART00000135118ENSDART00000147305
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000040346 N/A N/A N/A 0.065±0.00 0.464±0.00
ENSDART00000135118 7.886±1.29 5.011±0.00 1.350±0.00 N/A 0.525±0.00
ENSDART00000147305 N/A N/A 0.505±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00070X CIL_00070X_0001 CGP 17:33432713-33495062
CIL_000739 CIL_000739_0001 CGP 17:33438506-33514091

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005488 IEA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000084710 EFR3B EFR3 homolog B (S. cerevisiae) protein_coding Homo_sapiens
ENSMUSG00000020658 Efr3b EFR3 homolog B (S. cerevisiae) protein_coding Mus_musculus

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