C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: hypoxia-inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) b
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000034293 hif1ab 7955 - 20:20398771-20427737 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000018500 hif1ab-001 20398771-20427737 protein_coding
  ENSDART00000047580 hif1ab-201 20398772-20427586 protein_coding
  ENSDART00000152759 hif1ab-003 20400041-20403928 processed_transcript
  ENSDART00000152791 hif1ab-002 20413908-20427608 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000018500ENSDART00000047580
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000018500 40.321±14.77 37.951±10.02 13.373±0.00 5.703±0.00 20.606±0.00
ENSDART00000047580 8.103±0.92 69.286±5.07 47.345±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001666 IEP response to hypoxia
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0004871 IEA signal transducer activity
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0007165 IEA signal transduction
GO:0046983 IEA protein dimerization activity
GO:0051402 IGI neuron apoptotic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000100644 HIF1A hypoxia inducible factor 1, alpha subunit (basic helix-loop-helix transcription factor) protein_coding Homo_sapiens
ENSMUSG00000021109 Hif1a hypoxia inducible factor 1, alpha subunit protein_coding Mus_musculus

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