C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: GATA-binding protein 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000035831 gata6 7955 - Zv9_scaffold3540:164734-175324 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000051998 gata6-201 164849-175324 protein_coding
  ENSDART00000051999 gata6-202 164734-174290 protein_coding
  ENSDART00000077947 gata6-203 164849-174242 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000051998ENSDART00000051999ENSDART00000077947
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000051998 0.066±0.04 4.937±0.00 0.278±0.00 2.078±0.00 0.297±0.00
ENSDART00000051999 N/A 7.273±0.00 0.603±0.00 0.436±0.00 N/A
ENSDART00000077947 0.065±0.03 4.392±0.92 N/A 0.832±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001889 IMP liver development
GO:0003007 IMP heart morphogenesis
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006355 IEA regulation of transcription, DNA-dependent
GO:0008270 IEA zinc ion binding
GO:0030099 IGI myeloid cell differentiation
GO:0043565 IEA sequence-specific DNA binding
GO:0045893 IEA positive regulation of transcription, DNA-dependent
GO:0045944 IGI positive regulation of transcription from RNA polymerase II promoter
GO:0048565 IMP digestive tract development
GO:0060975 IGI cardioblast migration to the midline involved in heart field formation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000141448 GATA6 GATA binding protein 6 protein_coding Homo_sapiens
ENSMUSG00000005836 Gata6 GATA binding protein 6 protein_coding Mus_musculus

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