C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: heterogeneous nuclear ribonucleoprotein A1b
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000036675 hnrnpa1b 7955 + 23:36358083-36361962 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000053267 hnrnpa1b-001 36358083-36361161 protein_coding
  ENSDART00000127174 hnrnpa1b-002 36359205-36361962 nonsense_mediated_decay
  ENSDART00000131711 hnrnpa1b-004 36360261-36361113 protein_coding
  ENSDART00000134607 hnrnpa1b-003 36359972-36361959 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000053267ENSDART00000127174
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000053267 33.276±26.60 63.031±33.77 156.518±0.00 10.265±0.00 14.757±0.00
ENSDART00000127174 27.619±0.00 68.658±7.75 98.164±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002TM CIL_0002TM_0001 CGP 23:36348765-36361962
CIL_0002TL CIL_0002TL_0001 CGP 23:36358083-36367896

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0019012 IEA virion
GO:0019013 IEA viral nucleocapsid
GO:0030529 IEA ribonucleoprotein complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000135486 HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 protein_coding Homo_sapiens
ENSG00000139675 HNRNPA1L2 heterogeneous nuclear ribonucleoprotein A1-like 2 protein_coding Homo_sapiens
ENSMUSG00000046434 Hnrnpa1 heterogeneous nuclear ribonucleoprotein A1 protein_coding Mus_musculus

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