C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tubulin, beta 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000037997 tubb5 7955 + 16:11935861-11944510 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000055380 tubb5-201 11935861-11944510 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000055380
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000055380 64.988±20.64 0.613±0.29 3.535±0.85 0.269±0.00 2.177±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001X1 CIL_0001X1_0001 CGP 16:11904517-11944510
CIL_0005ET CIL_0005ET_0001 CGP 16:11935861-11963017

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003924 IEA GTPase activity
GO:0005198 NAS structural molecule activity
GO:0005200 IEA structural constituent of cytoskeleton
GO:0005525 IEA GTP binding
GO:0005737 IEA cytoplasm
GO:0005856 NAS cytoskeleton
GO:0005874 IEA microtubule
GO:0006184 IEA GTP catabolic process
GO:0007017 IEA microtubule-based process
GO:0043234 IEA protein complex
GO:0051258 IEA protein polymerization

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000196230 TUBB tubulin, beta class I protein_coding Homo_sapiens
ENSG00000261812 TUBB8P7 tubulin, beta 8 class VIII pseudogene 7 polymorphic_pseudogene Homo_sapiens
ENSMUSG00000001525 Tubb5 tubulin, beta 5 class I protein_coding Mus_musculus

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