C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zgc:171759
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000039547 zgc:171759 7955 + 25:37383761-37384792 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000057788 zgc:171759-202 37383761-37384792 protein_coding
  ENSDART00000152449 zgc:171759-001 37383761-37384135 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; MuscleENSDART00000152449
Transcript ID Muscle
ENSDART00000152449 0.590±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ON CIL_0007ON_0004 UCNEbase 25:37216824-37485434
CIL_0000LK CIL_0000LK_0001 CGP 25:37383761-37385647

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000786 IEA nucleosome
GO:0003677 IEA DNA binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0006334 IEA nucleosome assembly
GO:0043565 IEA sequence-specific DNA binding
GO:0046982 IEA protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000101812 H2BFM H2B histone family, member M protein_coding Homo_sapiens
ENSG00000123569 H2BFWT H2B histone family, member W, testis-specific protein_coding Homo_sapiens
ENSG00000146047 HIST1H2BA histone cluster 1, H2ba protein_coding Homo_sapiens
ENSMUSG00000045022 1700024P04Rik RIKEN cDNA 1700024P04 gene protein_coding Mus_musculus
ENSMUSG00000048155 H2bfm H2B histone family, member M protein_coding Mus_musculus
ENSMUSG00000050799 Hist1h2ba histone cluster 1, H2ba protein_coding Mus_musculus

Loading