C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: superoxide dismutase 2, mitochondrial
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000042644 sod2 7955 + 20:30963842-30973455 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000062556 sod2-001 30965086-30973455 protein_coding
  ENSDART00000152990 sod2-003 30964070-30973453 processed_transcript
  ENSDART00000153069 sod2-002 30963842-30969002 processed_transcript
  ENSDART00000153344 sod2-004 30965075-30973297 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000062556
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000062556 82.040±1.56 220.502±143.71 58.516±0.00 4.869±0.00 68.674±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003I8 CIL_0003I8_0001 CGP 20:30948503-30964154
CIL_0003I5 CIL_0003I5_0001 CGP 20:30957322-30973455

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004784 IEA superoxide dismutase activity
GO:0006801 IEA superoxide metabolic process
GO:0016491 IEA oxidoreductase activity
GO:0046686 IEP response to cadmium ion
GO:0046872 IEA metal ion binding
GO:0051597 IDA response to methylmercury
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000112096 SOD2 superoxide dismutase 2, mitochondrial protein_coding Homo_sapiens
ENSMUSG00000006818 Sod2 superoxide dismutase 2, mitochondrial protein_coding Mus_musculus

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