C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nephrosis 2, idiopathic, steroid-resistant (podocin)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000042850 nphs2 7955 - 22:17473247-17478545 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000062891 nphs2-201 17473251-17478545 protein_coding
  ENSDART00000136119 nphs2-001 17473247-17478545 protein_coding
  ENSDART00000144505 nphs2-002 17475717-17478237 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyMuscleENSDART00000062891ENSDART00000136119ENSDART00000144505
Transcript ID Brain Heart Kidney Muscle
ENSDART00000062891 0.109±0.05 0.114±0.00 3.692±0.31 1.233±0.00
ENSDART00000136119 0.094±0.05 N/A N/A N/A
ENSDART00000144505 0.202±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001WC CIL_0001WC_0001 CGP 22:17459191-17478545
CIL_0001WB CIL_0001WB_0001 CGP 22:17473247-17502695

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001822 IMP kidney development
GO:0016020 IEA membrane
GO:0032835 IMP glomerulus development

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000116218 NPHS2 nephrosis 2, idiopathic, steroid-resistant (podocin) protein_coding Homo_sapiens
ENSMUSG00000026602 Nphs2 nephrosis 2, podocin protein_coding Mus_musculus

Loading