C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: alkB, alkylation repair homolog 3 (E. coli)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000045606 alkbh3 7955 + 25:31223308-31253150 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000067057 alkbh3-001 31223308-31253150 protein_coding
  ENSDART00000123220 alkbh3-201 31227670-31253148 protein_coding
  ENSDART00000145924 alkbh3-004 31223346-31241378 protein_coding
  ENSDART00000147327 alkbh3-002 31223318-31233757 protein_coding
  ENSDART00000148250 alkbh3-003 31223367-31233686 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000067057ENSDART00000123220ENSDART00000145924
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000067057 3.964±0.25 2.427±1.78 2.533±0.00 N/A 3.206±0.00
ENSDART00000123220 1.715±0.60 6.519±4.51 4.289±2.27 0.185±0.00 2.178±0.00
ENSDART00000145924 N/A N/A N/A 0.209±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002UX CIL_0002UX_0001 CGP 25:31185671-31253150
CIL_0002UW CIL_0002UW_0001 CGP 25:31223308-31289294

Gene Ontology
GO IDEvidence TypeGO Description
GO:0016491 IEA oxidoreductase activity
GO:0016706 IEA oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000166199 ALKBH3 alkB, alkylation repair homolog 3 (E. coli) protein_coding Homo_sapiens
ENSMUSG00000040174 Alkbh3 alkB, alkylation repair homolog 3 (E. coli) protein_coding Mus_musculus
ENSMUSG00000098004 Gm27027 predicted gene, 27027 protein_coding Mus_musculus

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