C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ATG4 autophagy related 4 homolog B (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000052104 atg4b 7955 + 6:26799028-26813241 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000121558 atg4b-001 26799028-26813241 protein_coding
  ENSDART00000154161 atg4b-002 26800365-26813174 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000121558ENSDART00000154161
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000121558 11.202±1.60 4.154±0.20 8.903±0.00 0.444±0.00 4.369±0.00
ENSDART00000154161 3.827±0.15 1.668±0.00 1.729±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004UA CIL_0004UA_0001 CGP 6:26799028-26817072

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005737 IEA cytoplasm
GO:0006508 IEA proteolysis
GO:0006810 IEA transport
GO:0006914 IEA autophagy
GO:0008233 IEA peptidase activity
GO:0008234 IEA cysteine-type peptidase activity
GO:0015031 IEA protein transport
GO:0016787 IEA hydrolase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000168397 ATG4B autophagy related 4B, cysteine peptidase protein_coding Homo_sapiens
ENSMUSG00000026280 Atg4b autophagy related 4B, cysteine peptidase protein_coding Mus_musculus

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